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Unigene wheat nimblegen 40k unigene microarray
Wheat Nimblegen 40k Unigene Microarray, supplied by Unigene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/wheat+nimblegen+40k+unigene+microarray/wheat+nimblegen+40k+unigene+microarray/pmc04054855-400-12-15
Average 90 stars, based on 1 article reviews
wheat nimblegen 40k unigene microarray - by Bioz Stars, 2026-09
90/100 stars

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Microarray:

Article Title: A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Article Snippet: .. The Wheat NimbleGen 40K Unigene Microarray The wheat ( Triticum aestivum ) NimbleGen 40K unigene microarray was designed using the Triticum aestivum NCBI unigene set build number 55 counting 40,349 unigenes, resulting from the assembly of 960,174 ESTs and mRNAs ( http://www.ncbi.nlm.nih.gov/UniGene/UGOrg.cgi?TAXID=4565 ). .. Unigene sequences were masked based on a k-mer frequency analysis.

Article Title: A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Article Snippet: .. Genome Rearrangements Shaped the Wheat Genome through the Formation of Gene Islands By hybridizing a newly developed wheat NimbleGen 40K unigene microarray with MTP BAC pools from the sequence-ready version of the chromosome 3B physical map as well as with 15 cDNA samples originating from five different tissues at three developmental stages, we established the first transcription map of a wheat chromosome. ..

Article Title: A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Article Snippet: .. Thus, to perform a whole-chromosome expression profiling of wheat genes on chromosome 3B, we developed an in-house wheat NimbleGen 40K unigene microarray using the Triticum aestivum National Center for Biotechnology Information (NCBI) unigene build number 55 (February 2009; http://www.ncbi.nlm.nih.gov/UniGene/UGOrg.cgi?TAXID=4565 ). ..

Article Title: A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat
Article Snippet: .. IB produced all the PCR marker data and the hybridization on the wheat NimbleGen 40k unigene microarray and analyzed the hybridization results. ..

Article Title: A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat
Article Snippet: .. A total of 1,611 PCR markers, including the newly developed 1,200 ISBP and 200 SSR, the 171 publicly available PCR markers, and 40 of the 445 COS corresponding to genes not present on the wheat NimbleGen 40k unigene microarray, werefirst checked for their specificity to wheat chromosome1BL using aneuploid lines from cv Chinese Spring,including a nullisomic-1B-tetra-somic 1A line, the 1BL and 1BS ditelosomic lines[ , ]. ..

Article Title: A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Article Snippet: .. By hybridizing a newly developed wheat NimbleGen 40K unigene microarray with MTP BAC pools from the sequence-ready version of the chromosome 3B physical map as well as with 15 cDNA samples originating from five different tissues at three developmental stages, we established the first transcription map of a wheat chromosome. ..

Article Title: A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Article Snippet: .. In this study, we established an improved version of the chromosome 3B physical map and used it to map almost 3,000 genes whose expression patterns were tested in 15 different conditions using a newly developed wheat NimbleGen 40K unigene microarray. ..

Article Title: A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat
Article Snippet: Data were extracted from scanned images using the NimbleScan 2.5 Software (Roche NimbleGen Inc.) that allows for automated grid alignment, extraction and generation of data files. .. For the wheat NimbleGen 40k unigene microarray,the normalization of the MTP pool data was done using the methods developed by Rustenholz et al. [ , ]. ..

BAC Assay:

Article Title: A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Article Snippet: .. Genome Rearrangements Shaped the Wheat Genome through the Formation of Gene Islands By hybridizing a newly developed wheat NimbleGen 40K unigene microarray with MTP BAC pools from the sequence-ready version of the chromosome 3B physical map as well as with 15 cDNA samples originating from five different tissues at three developmental stages, we established the first transcription map of a wheat chromosome. ..

Article Title: A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Article Snippet: .. By hybridizing a newly developed wheat NimbleGen 40K unigene microarray with MTP BAC pools from the sequence-ready version of the chromosome 3B physical map as well as with 15 cDNA samples originating from five different tissues at three developmental stages, we established the first transcription map of a wheat chromosome. ..

Sequencing:

Article Title: A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Article Snippet: .. Genome Rearrangements Shaped the Wheat Genome through the Formation of Gene Islands By hybridizing a newly developed wheat NimbleGen 40K unigene microarray with MTP BAC pools from the sequence-ready version of the chromosome 3B physical map as well as with 15 cDNA samples originating from five different tissues at three developmental stages, we established the first transcription map of a wheat chromosome. ..

Article Title: A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Article Snippet: .. By hybridizing a newly developed wheat NimbleGen 40K unigene microarray with MTP BAC pools from the sequence-ready version of the chromosome 3B physical map as well as with 15 cDNA samples originating from five different tissues at three developmental stages, we established the first transcription map of a wheat chromosome. ..

Expressing:

Article Title: A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Article Snippet: .. Thus, to perform a whole-chromosome expression profiling of wheat genes on chromosome 3B, we developed an in-house wheat NimbleGen 40K unigene microarray using the Triticum aestivum National Center for Biotechnology Information (NCBI) unigene build number 55 (February 2009; http://www.ncbi.nlm.nih.gov/UniGene/UGOrg.cgi?TAXID=4565 ). ..

Article Title: A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Article Snippet: .. In this study, we established an improved version of the chromosome 3B physical map and used it to map almost 3,000 genes whose expression patterns were tested in 15 different conditions using a newly developed wheat NimbleGen 40K unigene microarray. ..

Produced:

Article Title: A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat
Article Snippet: .. IB produced all the PCR marker data and the hybridization on the wheat NimbleGen 40k unigene microarray and analyzed the hybridization results. ..

Polymerase Chain Reaction:

Article Title: A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat
Article Snippet: .. IB produced all the PCR marker data and the hybridization on the wheat NimbleGen 40k unigene microarray and analyzed the hybridization results. ..

Article Title: A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat
Article Snippet: .. A total of 1,611 PCR markers, including the newly developed 1,200 ISBP and 200 SSR, the 171 publicly available PCR markers, and 40 of the 445 COS corresponding to genes not present on the wheat NimbleGen 40k unigene microarray, werefirst checked for their specificity to wheat chromosome1BL using aneuploid lines from cv Chinese Spring,including a nullisomic-1B-tetra-somic 1A line, the 1BL and 1BS ditelosomic lines[ , ]. ..

Marker:

Article Title: A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat
Article Snippet: .. IB produced all the PCR marker data and the hybridization on the wheat NimbleGen 40k unigene microarray and analyzed the hybridization results. ..

Hybridization:

Article Title: A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat
Article Snippet: .. IB produced all the PCR marker data and the hybridization on the wheat NimbleGen 40k unigene microarray and analyzed the hybridization results. ..



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Unigene wheat nimblegen 40k unigene microarray
Wheat Nimblegen 40k Unigene Microarray, supplied by Unigene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/wheat+nimblegen+40k+unigene+microarray/wheat+nimblegen+40k+unigene+microarray/pmc04054855-400-12-15
Average 90 stars, based on 1 article reviews
wheat nimblegen 40k unigene microarray - by Bioz Stars, 2026-09
90/100 stars
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